| 6/09 | |  | |  | | Stage 1 : Gijon T.T.T. (28 km) | | | | ONCE - Eroski | |
| 7/09 | | | | | | Stage 2 : Gijon - Cangas de Onis (148 km) | |  | | PEREZ RODRIGUEZ Luis | |
| 8/09 | | | |  | | Stage 3 : Cangas de Onis - Santander (154,3 km) | |  | | PETACCHI Alessandro | |
| 9/09 | | | | | | Stage 4 : Santander - Burgos (151 km) | |  | | ETXEBARRIA ARANA Unai | |
| 10/09 | | | | | | Stage 5 : Soria - Zaragoza (166,7 km) | | | | PETACCHI Alessandro | |
| 11/09 | | | | | | Stage 6 : Zaragoza I.T.T. (43,8 km) | | | | NOZAL VEGA Isidro | |
| 12/09 | | | |  | | Stage 7 : Huesca - Cauterets (Cambasque) (190 km) | |  | | RASMUSSEN Michael | |
| 13/09 | | | | | | Stage 8 : Cauterets - Val d'Aran/Puerto de Beret (166 km) | | | | RODRIGUEZ OLIVER Joaquim | |
| 14/09 | | | | | | Stage 9 : Vielha - Port d'Envalira (174,8 km) | | | | VALVERDE BELMONTE Alejandro | |
| 15/09 | | | | | | Stage 10 : Andorra - Sabadell (194 km) | |  | | ZABEL Erik | |
| 17/09 | | | | | | Stage 11 : Utiel - Cuenca (162 km) | | | | ZABEL Erik | |
| 18/09 | | | | | | Stage 12 : Cuenca - Albacete (168,8 km) | | | | PETACCHI Alessandro | |
| 19/09 | | | | | | Stage 13 : Albacete I.T.T. (53,3 km) | | | | NOZAL VEGA Isidro | |
| 20/09 | | | | | | Stage 14 : Albacete - Valdepeñas (167,4 km) | | | | PETACCHI Alessandro | |
| 21/09 | | | | | | Stage 15 : Valdepeñas - Sierra de la Pandera (172,1 km) | | | | VALVERDE BELMONTE Alejandro | |
| 23/09 | | | | | | Stage 16 : Jaen - Sierra Nevada (162 km) | |  | | CARDENAS RAVELO Felix Rafael | |
| 24/09 | | | | | | Stage 17 : Granada - Cordoba (188,4 km) | |  | | MILLAR David | |
| 25/09 | | | | | | Stage 18 : Las Rozas - Las Rozas (143,8 km) | | | | DIAZ LOBATO Pedro | |
| 26/09 | | | | | | Stage 19 : La Vega de Alcobendas - Collado Villalba (164 km) | | | | SIMEONI Filippo | |
| 27/09 | | | | | | Stage 20 : San Lorenzo de El Escorial - Alto de Abantos I.T.T. (11,2 km) | | | | HERAS HERNANDEZ Roberto | |
| 28/09 | | | | | | Stage 21 : Madrid - Madrid (145,8 km) | | | | PETACCHI Alessandro | |
| 28/09 | | | | | | General classification | | | | HERAS HERNANDEZ Roberto | |
| 28/09 | | | | | | Points classification | | | | ZABEL Erik | |
| 28/09 | | | | | | Mountains classification | | | | CARDENAS RAVELO Felix Rafael | |
